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pcs cg addgene plasmid  (Addgene inc)


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    Structured Review

    Addgene inc pcs cg addgene plasmid
    Pcs Cg Addgene Plasmid, supplied by Addgene inc, used in various techniques. Bioz Stars score: 92/100, based on 10 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pbmn+yfp+parkin/pBMN-YFP-Parkin+(Plasmid+%2359416)/pm38354087-192-159-160
    Average 92 stars, based on 10 article reviews
    pcs cg addgene plasmid - by Bioz Stars, 2026-10
    92/100 stars

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    Related Articles

    Transfection:

    Article Title: A sensitive and quantitative mKeima assay for mitophagy via FACS
    Article Snippet: Materials: 293T cells (ATCC CRL-3216) DMEM, high glucose (Thermofisher #11960–044 with phenol red or #31053–028) Sodium pyruvate (100 mM) (Thermofisher #11360–070) GlutaMAX (100x) (Thermofisher #35050–061) Fetal bovine serum (FBS), heat inactivated (Sigma F8317–500 ml) DMEM complete media: DMEM media supplemented with 1x GlutaMAX and 1 mM sodium pyruvate and 10% FBS. .. Polyethylenimine, linear, MW 250000, transfection grade (PEI 25K) (Polysciences, 23966–1) Opti-MEM reduced serum medium (Thermofisher 31985062) pBMN-YFP-Parkin (Addgene, plasmid#59416) pCHAC-mt-mKeima (Addgene, plasmid#72342) pCMV-VSV-G (Addgene, plasmid#8454) pUMVC (Addgene, plasmid#8449) pHAGE-mt-mKeima (Addgene, plasmid#131626) pHDM-G (Harvard Medical School, EvNO00061606) pHDM-HGPM2 (Harvard Medical School, EvNO00061607) pHDM-tat1B (Harvard Medical School, EvNO00061608) pRC-CMV-rev1B (Harvard Medical School, EvNO00061616) Nunc Cell Culture Treated 6-well plates (Thermofisher 140675) 1.5 ml MicroTube flat cap (SARSTEDT #72.690.300), autoclaved Millex-HV Syringe filter unit, 0.45 um, PVDF, 33 mm, gamma sterilized (EMDmillipore, SLHV033RB), ultra-low protein binding Monoject 1 ml tuberculin syringe (Coviden 8881501400) 15 ml polypropylene centrifuge tube (VitaScientific NSTF40173) Seed 1–1.2 × 10 6 293T cells per well in a 6-well plate. ..

    Article Title: IRGM1 links mitochondrial quality control to autoimmunity.
    Article Snippet: IFN-γ (BioLegend no. 575306), Torin1 (EMD Millipore no. 475991), Brefeldin A (BD Biosciences no. 555029), MRT-67307 (Sigma no. CAS1190378-57-4), LY294002 (Cayman no. 70920), bafilomycin A1 (Santa Cruz no. sc-201550), E64d (Sigma no. E8640), Pepstatin A (Sigma no. P5318), 3-MA (Sigma no. M9281), MitoTEMPO (Sigma no. SML0737), Oligomycin A (Sigma no. 75351), Antimycin A (Sigma no. A8674) and ethidium bromide (Bio-Rad no. 161-0433) were purchased. .. Plasmids, transduction and transfection. pCHAC-mt-mKeima-IRES-MCS2 was a generous gift from R. Youle (National Institute of Neurological Disorders and Stroke (NINDS)/NIH). pMRX-STING-GFP was a generous gift from N. Yan (University of Texas Southwestern (UTSW)). pBMN-YFP-Parkin (no. 59416) and pBMN-I-GFP (no. 1736) were bought from Addgene. ..

    Plasmid Preparation:

    Article Title: A sensitive and quantitative mKeima assay for mitophagy via FACS
    Article Snippet: Materials: 293T cells (ATCC CRL-3216) DMEM, high glucose (Thermofisher #11960–044 with phenol red or #31053–028) Sodium pyruvate (100 mM) (Thermofisher #11360–070) GlutaMAX (100x) (Thermofisher #35050–061) Fetal bovine serum (FBS), heat inactivated (Sigma F8317–500 ml) DMEM complete media: DMEM media supplemented with 1x GlutaMAX and 1 mM sodium pyruvate and 10% FBS. .. Polyethylenimine, linear, MW 250000, transfection grade (PEI 25K) (Polysciences, 23966–1) Opti-MEM reduced serum medium (Thermofisher 31985062) pBMN-YFP-Parkin (Addgene, plasmid#59416) pCHAC-mt-mKeima (Addgene, plasmid#72342) pCMV-VSV-G (Addgene, plasmid#8454) pUMVC (Addgene, plasmid#8449) pHAGE-mt-mKeima (Addgene, plasmid#131626) pHDM-G (Harvard Medical School, EvNO00061606) pHDM-HGPM2 (Harvard Medical School, EvNO00061607) pHDM-tat1B (Harvard Medical School, EvNO00061608) pRC-CMV-rev1B (Harvard Medical School, EvNO00061616) Nunc Cell Culture Treated 6-well plates (Thermofisher 140675) 1.5 ml MicroTube flat cap (SARSTEDT #72.690.300), autoclaved Millex-HV Syringe filter unit, 0.45 um, PVDF, 33 mm, gamma sterilized (EMDmillipore, SLHV033RB), ultra-low protein binding Monoject 1 ml tuberculin syringe (Coviden 8881501400) 15 ml polypropylene centrifuge tube (VitaScientific NSTF40173) Seed 1–1.2 × 10 6 293T cells per well in a 6-well plate. ..

    Article Title: Proline restores mitochondrial function and reverses aging hallmarks in senescent cells.
    Article Snippet: Briefly shRNA sequence targeting PRKAA1 (shAMPKa_1: 50-30 ATGATGTCAGATGGTGAATTT) and PARK2 (shParkin_1: 50-30 GGATCAGCAGAGCATTGTTCA) were designed using the Invitrogen Block-iT RNAi Designer (Thermo Fisher Scientific) and cloned into the pLKO.1-puro lentiviral vector (Addgene plasmid # 8453).83 To ensure specific gene knockdown, a second shRNA lentiviral vector for PRKAA1 (shAMPKa_2; catalog no. pLKO.1shAMPKa1-TRCN0000000861) and for PARK2 (shParkin_2; catalog no. pLKO.1shPARK2-TRCN0000000285) were procured from Sigma-Aldrich. .. To overexpress Parkin, the coding sequence of PARK2 was extracted from pBMN-YFP-Parkin (Addgene plasmid #59416)84 and cloned via the restriction sites ClaI and XbaI into pCS-IRES-puro to generate pCS-Parkin-IRES-puro. .. The pCS-IRES-puro vector was created in our laboratory by replacing the CMV-GFP in pCS-CG (Addgene plasmid # 12154)85 with the IRES and the puromycin resistance gene puromycin N-acetyl-transferase (pac). pHAGE-mt-mKeima was a gift from Richard Youle (Addgene plasmid #131626; http://n2t.net/addgene:131626; RRID: Addgene_131626).86 Lentivirus production was carried out by transfecting 293T cells with three plasmids (lentiviral vector, psPAX2, and pMD2.G), using the standard calcium phosphate precipitation method.

    Cell Culture:

    Article Title: A sensitive and quantitative mKeima assay for mitophagy via FACS
    Article Snippet: Materials: 293T cells (ATCC CRL-3216) DMEM, high glucose (Thermofisher #11960–044 with phenol red or #31053–028) Sodium pyruvate (100 mM) (Thermofisher #11360–070) GlutaMAX (100x) (Thermofisher #35050–061) Fetal bovine serum (FBS), heat inactivated (Sigma F8317–500 ml) DMEM complete media: DMEM media supplemented with 1x GlutaMAX and 1 mM sodium pyruvate and 10% FBS. .. Polyethylenimine, linear, MW 250000, transfection grade (PEI 25K) (Polysciences, 23966–1) Opti-MEM reduced serum medium (Thermofisher 31985062) pBMN-YFP-Parkin (Addgene, plasmid#59416) pCHAC-mt-mKeima (Addgene, plasmid#72342) pCMV-VSV-G (Addgene, plasmid#8454) pUMVC (Addgene, plasmid#8449) pHAGE-mt-mKeima (Addgene, plasmid#131626) pHDM-G (Harvard Medical School, EvNO00061606) pHDM-HGPM2 (Harvard Medical School, EvNO00061607) pHDM-tat1B (Harvard Medical School, EvNO00061608) pRC-CMV-rev1B (Harvard Medical School, EvNO00061616) Nunc Cell Culture Treated 6-well plates (Thermofisher 140675) 1.5 ml MicroTube flat cap (SARSTEDT #72.690.300), autoclaved Millex-HV Syringe filter unit, 0.45 um, PVDF, 33 mm, gamma sterilized (EMDmillipore, SLHV033RB), ultra-low protein binding Monoject 1 ml tuberculin syringe (Coviden 8881501400) 15 ml polypropylene centrifuge tube (VitaScientific NSTF40173) Seed 1–1.2 × 10 6 293T cells per well in a 6-well plate. ..

    Protein Binding:

    Article Title: A sensitive and quantitative mKeima assay for mitophagy via FACS
    Article Snippet: Materials: 293T cells (ATCC CRL-3216) DMEM, high glucose (Thermofisher #11960–044 with phenol red or #31053–028) Sodium pyruvate (100 mM) (Thermofisher #11360–070) GlutaMAX (100x) (Thermofisher #35050–061) Fetal bovine serum (FBS), heat inactivated (Sigma F8317–500 ml) DMEM complete media: DMEM media supplemented with 1x GlutaMAX and 1 mM sodium pyruvate and 10% FBS. .. Polyethylenimine, linear, MW 250000, transfection grade (PEI 25K) (Polysciences, 23966–1) Opti-MEM reduced serum medium (Thermofisher 31985062) pBMN-YFP-Parkin (Addgene, plasmid#59416) pCHAC-mt-mKeima (Addgene, plasmid#72342) pCMV-VSV-G (Addgene, plasmid#8454) pUMVC (Addgene, plasmid#8449) pHAGE-mt-mKeima (Addgene, plasmid#131626) pHDM-G (Harvard Medical School, EvNO00061606) pHDM-HGPM2 (Harvard Medical School, EvNO00061607) pHDM-tat1B (Harvard Medical School, EvNO00061608) pRC-CMV-rev1B (Harvard Medical School, EvNO00061616) Nunc Cell Culture Treated 6-well plates (Thermofisher 140675) 1.5 ml MicroTube flat cap (SARSTEDT #72.690.300), autoclaved Millex-HV Syringe filter unit, 0.45 um, PVDF, 33 mm, gamma sterilized (EMDmillipore, SLHV033RB), ultra-low protein binding Monoject 1 ml tuberculin syringe (Coviden 8881501400) 15 ml polypropylene centrifuge tube (VitaScientific NSTF40173) Seed 1–1.2 × 10 6 293T cells per well in a 6-well plate. ..

    Sequencing:

    Article Title: Proline restores mitochondrial function and reverses aging hallmarks in senescent cells.
    Article Snippet: Briefly shRNA sequence targeting PRKAA1 (shAMPKa_1: 50-30 ATGATGTCAGATGGTGAATTT) and PARK2 (shParkin_1: 50-30 GGATCAGCAGAGCATTGTTCA) were designed using the Invitrogen Block-iT RNAi Designer (Thermo Fisher Scientific) and cloned into the pLKO.1-puro lentiviral vector (Addgene plasmid # 8453).83 To ensure specific gene knockdown, a second shRNA lentiviral vector for PRKAA1 (shAMPKa_2; catalog no. pLKO.1shAMPKa1-TRCN0000000861) and for PARK2 (shParkin_2; catalog no. pLKO.1shPARK2-TRCN0000000285) were procured from Sigma-Aldrich. .. To overexpress Parkin, the coding sequence of PARK2 was extracted from pBMN-YFP-Parkin (Addgene plasmid #59416)84 and cloned via the restriction sites ClaI and XbaI into pCS-IRES-puro to generate pCS-Parkin-IRES-puro. .. The pCS-IRES-puro vector was created in our laboratory by replacing the CMV-GFP in pCS-CG (Addgene plasmid # 12154)85 with the IRES and the puromycin resistance gene puromycin N-acetyl-transferase (pac). pHAGE-mt-mKeima was a gift from Richard Youle (Addgene plasmid #131626; http://n2t.net/addgene:131626; RRID: Addgene_131626).86 Lentivirus production was carried out by transfecting 293T cells with three plasmids (lentiviral vector, psPAX2, and pMD2.G), using the standard calcium phosphate precipitation method.

    Clone Assay:

    Article Title: Proline restores mitochondrial function and reverses aging hallmarks in senescent cells.
    Article Snippet: Briefly shRNA sequence targeting PRKAA1 (shAMPKa_1: 50-30 ATGATGTCAGATGGTGAATTT) and PARK2 (shParkin_1: 50-30 GGATCAGCAGAGCATTGTTCA) were designed using the Invitrogen Block-iT RNAi Designer (Thermo Fisher Scientific) and cloned into the pLKO.1-puro lentiviral vector (Addgene plasmid # 8453).83 To ensure specific gene knockdown, a second shRNA lentiviral vector for PRKAA1 (shAMPKa_2; catalog no. pLKO.1shAMPKa1-TRCN0000000861) and for PARK2 (shParkin_2; catalog no. pLKO.1shPARK2-TRCN0000000285) were procured from Sigma-Aldrich. .. To overexpress Parkin, the coding sequence of PARK2 was extracted from pBMN-YFP-Parkin (Addgene plasmid #59416)84 and cloned via the restriction sites ClaI and XbaI into pCS-IRES-puro to generate pCS-Parkin-IRES-puro. .. The pCS-IRES-puro vector was created in our laboratory by replacing the CMV-GFP in pCS-CG (Addgene plasmid # 12154)85 with the IRES and the puromycin resistance gene puromycin N-acetyl-transferase (pac). pHAGE-mt-mKeima was a gift from Richard Youle (Addgene plasmid #131626; http://n2t.net/addgene:131626; RRID: Addgene_131626).86 Lentivirus production was carried out by transfecting 293T cells with three plasmids (lentiviral vector, psPAX2, and pMD2.G), using the standard calcium phosphate precipitation method.

    Transduction:

    Article Title: IRGM1 links mitochondrial quality control to autoimmunity.
    Article Snippet: IFN-γ (BioLegend no. 575306), Torin1 (EMD Millipore no. 475991), Brefeldin A (BD Biosciences no. 555029), MRT-67307 (Sigma no. CAS1190378-57-4), LY294002 (Cayman no. 70920), bafilomycin A1 (Santa Cruz no. sc-201550), E64d (Sigma no. E8640), Pepstatin A (Sigma no. P5318), 3-MA (Sigma no. M9281), MitoTEMPO (Sigma no. SML0737), Oligomycin A (Sigma no. 75351), Antimycin A (Sigma no. A8674) and ethidium bromide (Bio-Rad no. 161-0433) were purchased. .. Plasmids, transduction and transfection. pCHAC-mt-mKeima-IRES-MCS2 was a generous gift from R. Youle (National Institute of Neurological Disorders and Stroke (NINDS)/NIH). pMRX-STING-GFP was a generous gift from N. Yan (University of Texas Southwestern (UTSW)). pBMN-YFP-Parkin (no. 59416) and pBMN-I-GFP (no. 1736) were bought from Addgene. ..



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